The tertiary structure of the active site of the enzyme is determined by hydrogen and ionic bonds between -NH2 and -COOH groups and bonding and interactions between the R-groups.Each enzyme has an optimum pH.Since the pH is a measure of the hydrogen ion concentration, changes to the H+ concentration may alter the shape of the active site by:
- altering the charges on the amino acids that make up the active site
- breaking the hydrogen and ionic bonds that maintain the enzymes tertiary (3D) structure and causing the shape of the active site to change